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  5. LOC_Os01g58420

LOC_Os01g58420


Description : AP2 domain containing protein, expressed


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g58420
Cluster HCCA clusters: cluster_0034

Target Alias Description ECC score Gene Family Method Actions
A4A49_07545 No alias pathogenesis-related genes transcriptional activator pti6 0.04 Orthogroups_2024-Update
A4A49_13998 No alias ethylene-responsive transcription factor 4 0.03 Orthogroups_2024-Update
A4A49_16759 No alias ethylene-responsive transcription factor erf012 0.02 Orthogroups_2024-Update
A4A49_16905 No alias ethylene-responsive transcription factor 5 0.02 Orthogroups_2024-Update
A4A49_17723 No alias ethylene-responsive transcription factor 1 0.03 Orthogroups_2024-Update
A4A49_18156 No alias ethylene-responsive transcription factor shine 3 0.02 Orthogroups_2024-Update
A4A49_20472 No alias ethylene-responsive transcription factor 13 0.04 Orthogroups_2024-Update
A4A49_21212 No alias ethylene-responsive transcription factor erf008 0.03 Orthogroups_2024-Update
A4A49_21979 No alias ethylene-responsive transcription factor erf034 0.02 Orthogroups_2024-Update
A4A49_28100 No alias ethylene-responsive transcription factor erf017 0.02 Orthogroups_2024-Update
A4A49_34891 No alias dehydration-responsive element-binding protein 3 0.02 Orthogroups_2024-Update
At1g01250 No alias Ethylene-responsive transcription factor ERF023... 0.03 Orthogroups_2024-Update
At1g33760 No alias Ethylene-responsive transcription factor ERF022... 0.02 Orthogroups_2024-Update
At1g44830 No alias Ethylene-responsive transcription factor ERF014... 0.02 Orthogroups_2024-Update
At1g63030 No alias Dehydration-responsive element-binding protein 1E... 0.03 Orthogroups_2024-Update
At1g75490 No alias Dehydration-responsive element-binding protein 2D... 0.02 Orthogroups_2024-Update
At2g33710 No alias Integrase-type DNA-binding superfamily protein... 0.02 Orthogroups_2024-Update
At2g46310 No alias Ethylene-responsive transcription factor CRF5... 0.02 Orthogroups_2024-Update
At3g50260 No alias Ethylene-responsive transcription factor ERF011... 0.03 Orthogroups_2024-Update
At5g47230 No alias ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9] 0.03 Orthogroups_2024-Update
Bradi1g46690 No alias related to AP2 12 0.02 Orthogroups_2024-Update
Bradi2g22505 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g10107 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.A03039.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.A03436.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.01 Orthogroups_2024-Update
Brara.D01307.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.F02721.1 No alias subgroup ERF-V transcription factor 0.03 Orthogroups_2024-Update
Brara.G02798.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Brara.G03313.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.02 Orthogroups_2024-Update
Brara.H01375.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H02645.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.I00552.1 No alias subgroup ERF-V transcription factor 0.03 Orthogroups_2024-Update
Brara.J02098.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G007406 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G039870 No alias related to AP2 4 0.02 Orthogroups_2024-Update
GRMZM2G069082 No alias C-repeat-binding factor 4 0.02 Orthogroups_2024-Update
GRMZM2G084264 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G139765 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G039300 No alias DORNROSCHEN-like 0.02 Orthogroups_2024-Update
Glyma.03G017300 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Glyma.03G162400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G062100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G063600 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
Glyma.06G221800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G250100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G145300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G186800 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.10G194200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G014800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G053600 No alias DREB and EAR motif protein 2 0.02 Orthogroups_2024-Update
Glyma.11G199300 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Glyma.12G103100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G081600 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G152000 No alias C-repeat-binding factor 4 0.03 Orthogroups_2024-Update
Glyma.13G236500 No alias erf domain protein 9 0.02 Orthogroups_2024-Update
Glyma.14G205600 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Glyma.16G040000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G024300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G035500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G195900 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G018240.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU0Hr1G030500.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G055710.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G077680.2 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G093660.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G103660.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G080340.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G062940.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G080340.11 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G090800.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
LOC_Os02g43970 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g46220 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g46440 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g41780 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g22730 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g31580 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g38000 No alias dehydration-responsive element-binding protein,... 0.02 Orthogroups_2024-Update
MA_10430850g0010 No alias (at1g19210 : 114.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_115348g0020 No alias (at4g17500 : 116.0) Encodes a member of the ERF... 0.02 Orthogroups_2024-Update
MA_121581g0010 No alias (at1g22190 : 103.0) Integrase-type DNA-binding... 0.02 Orthogroups_2024-Update
MA_5805979g0010 No alias (at4g17500 : 88.2) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
MA_69434g0020 No alias (q40479|erf2_tobac : 84.0) Ethylene-responsive... 0.02 Orthogroups_2024-Update
MA_7500391g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_81029g0010 No alias (q9sxs8|erf3_tobac : 95.1) Ethylene-responsive... 0.02 Orthogroups_2024-Update
MA_9304g0020 No alias (at1g28360 : 87.4) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00005184-RA No alias (q40479|erf2_tobac : 141.0) Ethylene-responsive... 0.02 Orthogroups_2024-Update
PSME_00008357-RA No alias (at5g21960 : 123.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00037531-RA No alias (at5g61890 : 123.0) encodes a member of the ERF... 0.01 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00040934-RA No alias (at5g64750 : 100.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00051697-RA No alias (q40476|erf1_tobac : 102.0) Ethylene-responsive... 0.02 Orthogroups_2024-Update
PSME_00052455-RA No alias (at1g19210 : 114.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.001G094800 No alias cytokinin response factor 2 0.03 Orthogroups_2024-Update
Potri.001G155700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.001G157100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.001G187500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G079300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G139300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G080300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G138700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G073600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G057000 No alias erf domain protein 9 0.02 Orthogroups_2024-Update
Potri.012G108500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G055700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G099900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G055400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G131300 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Pp1s132_34V6 No alias transcriptional factor 0.03 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.03 Orthogroups_2024-Update
Pp1s21_247V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s233_111V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s276_72V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s296_32V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s31_112V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s8_127V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Seita.1G259200.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Seita.2G280400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G364700.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
Seita.7G188500.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.7G232100.1 No alias subgroup ERF-VIII transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G169400.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
Sobic.003G324400.2 No alias subgroup ERF-VIII transcription factor 0.01 Orthogroups_2024-Update
Sobic.005G014800.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Sobic.006G184700.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G101400.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G184400.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Solyc01g090560 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc03g120840 No alias ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc06g066540 No alias Ethylene-responsive transcription factor TINY (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen05g029570 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen07g024840 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen08g020590 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen08g026680 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen10g004900 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
MF GO:0008987 quinolinate synthetase A activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 32 82
No external refs found!