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  5. LOC_Os01g58680

LOC_Os01g58680


Description : apurinic endonuclease-redox protein, putative, expressed


Gene families : OG_42_0003043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g58680
Cluster HCCA clusters: cluster_0128

Target Alias Description ECC score Gene Family Method Actions
Seita.5G350300.1 No alias AP-endonuclease *(ARP) & EC_4.2 carbon-oxygen lyase 0.02 Orthogroups_2024-Update
Sobic.003G326500.1 No alias AP-endonuclease *(ARP) & EC_4.2 carbon-oxygen lyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
InterPro domains Description Start Stop
IPR003034 SAP_dom 87 119
IPR005135 Endo/exonuclease/phosphatase 242 490
No external refs found!