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  5. LOC_Os01g59150

LOC_Os01g59150


Description : tubulin/FtsZ domain containing protein, putative, expressed


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g59150
Cluster HCCA clusters: cluster_0072

Target Alias Description ECC score Gene Family Method Actions
119313 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
266715 No alias beta-6 tubulin 0.02 Orthogroups_2024-Update
A4A49_21669 No alias tubulin beta-2 chain 0.04 Orthogroups_2024-Update
A4A49_57434 No alias tubulin beta-8 chain 0.03 Orthogroups_2024-Update
Brara.E01346.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.04 Orthogroups_2024-Update
Brara.G02205.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G332809 No alias tubulin beta 8 0.03 Orthogroups_2024-Update
Glyma.05G207500 No alias beta-6 tubulin 0.02 Orthogroups_2024-Update
Glyma.05G246100 No alias beta-6 tubulin 0.02 Orthogroups_2024-Update
Glyma.17G258300 No alias tubulin beta-1 chain 0.02 Orthogroups_2024-Update
Kfl00215_0220 kfl00215_0220_v1.1 (p04690|tbb_chlre : 826.0) Tubulin beta-1/beta-2 chain -... 0.02 Orthogroups_2024-Update
LOC_Os03g56810 No alias tubulin/FtsZ domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_230579g0020 No alias (q76fs3|tbb6_orysa : 573.0) Tubulin beta-6 chain (Beta-6... 0.02 Orthogroups_2024-Update
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Mp2g09390.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Potri.001G106100 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
Potri.003G125400 No alias tubulin beta 8 0.03 Orthogroups_2024-Update
Potri.009G067100 No alias beta-6 tubulin 0.04 Orthogroups_2024-Update
Potri.009G067200 No alias beta-6 tubulin 0.02 Orthogroups_2024-Update
Sobic.003G328800.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Solyc04g081490 No alias beta-tubulin 0.02 Orthogroups_2024-Update
Solyc06g076640 No alias Tubulin beta chain (AHRD V3.3 *** M1CZM0_SOLTU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!