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  5. LOC_Os01g59260

LOC_Os01g59260


Description : transposon protein, putative, CACTA, En/Spm sub-class, expressed


Gene families : OG_42_0000101 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g59260
Cluster HCCA clusters: cluster_0013

Target Alias Description ECC score Gene Family Method Actions
Brara.J00655.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025312 DUF4216 974 1041
IPR004242 Transposase_21 304 511
IPR029480 Transpos_assoc 3 79
IPR025452 DUF4218 715 818
No external refs found!