LOC_Os01g59660


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g59660
Cluster HCCA clusters: cluster_0069

Target Alias Description ECC score Gene Family Method Actions
A4A49_01152 No alias transcription factor myb36 0.03 Orthogroups_2024-Update
A4A49_16262 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_35836 No alias transcription factor myb30 0.05 Orthogroups_2024-Update
At5g06100 No alias Transcription factor MYB33... 0.03 Orthogroups_2024-Update
Bradi2g11080 No alias myb domain protein 61 0.02 Orthogroups_2024-Update
Bradi2g56520 No alias myb domain protein 4 0.01 Orthogroups_2024-Update
Brara.G01033.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G064744 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
GRMZM2G117244 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
GRMZM2G131442 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
GRMZM2G169356 No alias myb domain protein 20 0.02 Orthogroups_2024-Update
GRMZM2G425427 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Glyma.06G300400 No alias myb domain protein 74 0.03 Orthogroups_2024-Update
Glyma.07G054000 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Glyma.09G206200 No alias myb domain protein 39 0.03 Orthogroups_2024-Update
Glyma.11G021600 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.12G105400 No alias myb domain protein 9 0.02 Orthogroups_2024-Update
LOC_Os12g33070 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.02 Orthogroups_2024-Update
Potri.002G096800 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
Potri.004G138000 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.004G215100 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Potri.013G056500 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.013G148600 No alias MYB-like 102 0.02 Orthogroups_2024-Update
Pp1s78_152V6 No alias myb-related transcription factor 0.02 Orthogroups_2024-Update
Seita.3G062200.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G132600.1 No alias transcriptional regulator *(MS188) & transcriptional... 0.03 Orthogroups_2024-Update
Seita.7G179600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.02 Orthogroups_2024-Update
Seita.8G244100.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Solyc05g051550 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRU0_SALMI) 0.02 Orthogroups_2024-Update
Solyc05g055030 No alias R2R3MYB transcription factor 10 0.03 Orthogroups_2024-Update
Sopen03g004680 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen05g003580 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g027120 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 42 89
IPR001005 SANT/Myb 95 138
No external refs found!