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  5. LOC_Os01g59690

LOC_Os01g59690


Description : OsFBX28 - F-box domain containing protein, expressed


Gene families : OG_42_0000982 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000982_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g59690
Cluster HCCA clusters: cluster_0038

Target Alias Description ECC score Gene Family Method Actions
A4A49_14937 No alias f-box protein 0.03 Orthogroups_2024-Update
A4A49_24676 No alias f-box protein 0.02 Orthogroups_2024-Update
At1g30200 No alias F-box protein At1g30200 [Source:UniProtKB/Swiss-Prot;Acc:Q9C534] 0.03 Orthogroups_2024-Update
At1g78100 No alias AUF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZX8] 0.03 Orthogroups_2024-Update
Bradi1g63950 No alias F-box family protein 0.03 Orthogroups_2024-Update
Bradi2g51180 No alias F-box family protein 0.02 Orthogroups_2024-Update
Brara.F03638.1 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Brara.G03558.1 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
Brara.I03368.1 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex 0.05 Orthogroups_2024-Update
GRMZM2G157631 No alias F-box family protein 0.02 Orthogroups_2024-Update
GRMZM2G317262 No alias F-box family protein 0.03 Orthogroups_2024-Update
GRMZM5G816545 No alias F-box family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G077600.2 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
MA_84207g0010 No alias (at5g46170 : 343.0) F-box family protein; CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00032125-RA No alias (at5g46170 : 401.0) F-box family protein; CONTAINS... 0.03 Orthogroups_2024-Update
Potri.002G094600 No alias F-box family protein 0.02 Orthogroups_2024-Update
Seita.9G422000.1 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
Solyc04g072930 No alias F-box protein (AHRD V3.3 *** W9S0P0_9ROSA) 0.02 Orthogroups_2024-Update
Sopen02g019570 No alias F-box-like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004575 sucrose alpha-glucosidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008987 quinolinate synthetase A activity IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0015926 glucosidase activity IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0090599 alpha-glucosidase activity IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!