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Description : pentatricopeptide, putative, expressed
Gene families : OG_42_0009882 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009882_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os01g60000 | |
| Cluster | HCCA clusters: cluster_0084 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| BP | GO:0006066 | alcohol metabolic process | IEP | Predicted GO |
| BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | Predicted GO |
| MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | Predicted GO |
| MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016829 | lyase activity | IEP | Predicted GO |
| MF | GO:0016836 | hydro-lyase activity | IEP | Predicted GO |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predicted GO |
| MF | GO:0016843 | amine-lyase activity | IEP | Predicted GO |
| MF | GO:0016844 | strictosidine synthase activity | IEP | Predicted GO |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0019751 | polyol metabolic process | IEP | Predicted GO |
| BP | GO:0034311 | diol metabolic process | IEP | Predicted GO |
| BP | GO:0034312 | diol biosynthetic process | IEP | Predicted GO |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | Predicted GO |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | Predicted GO |
| BP | GO:0046173 | polyol biosynthetic process | IEP | Predicted GO |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Predicted GO |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 156 | 185 |
| IPR002885 | Pentatricopeptide_repeat | 824 | 849 |
| IPR002885 | Pentatricopeptide_repeat | 519 | 544 |
| IPR002885 | Pentatricopeptide_repeat | 692 | 719 |
| IPR002885 | Pentatricopeptide_repeat | 925 | 948 |
| IPR002885 | Pentatricopeptide_repeat | 853 | 882 |
| IPR002885 | Pentatricopeptide_repeat | 260 | 285 |
| IPR002885 | Pentatricopeptide_repeat | 362 | 383 |
| IPR002885 | Pentatricopeptide_repeat | 187 | 217 |
| IPR002885 | Pentatricopeptide_repeat | 287 | 334 |
| IPR002885 | Pentatricopeptide_repeat | 748 | 795 |
| IPR002885 | Pentatricopeptide_repeat | 616 | 663 |
| No external refs found! |