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  5. LOC_Os01g60770

LOC_Os01g60770


Description : expansin precursor, putative, expressed


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g60770
Cluster HCCA clusters: cluster_0076

Target Alias Description ECC score Gene Family Method Actions
102623 No alias expansin A15 0.02 Orthogroups_2024-Update
231226 No alias expansin A9 0.02 Orthogroups_2024-Update
409954 No alias expansin A8 0.02 Orthogroups_2024-Update
90332 No alias Barwin-like endoglucanases superfamily protein 0.02 Orthogroups_2024-Update
91129 No alias expansin A15 0.02 Orthogroups_2024-Update
A4A49_04302 No alias expansin-a10 0.04 Orthogroups_2024-Update
A4A49_20002 No alias expansin-a12 0.03 Orthogroups_2024-Update
A4A49_38718 No alias expansin-a7 0.03 Orthogroups_2024-Update
A4A49_64370 No alias expansin-a1 0.03 Orthogroups_2024-Update
At1g20190 No alias Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3] 0.03 Orthogroups_2024-Update
At5g05290 No alias Expansin-A2 [Source:UniProtKB/Swiss-Prot;Acc:Q38866] 0.03 Orthogroups_2024-Update
At5g39270 No alias Expansin-A22 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL80] 0.04 Orthogroups_2024-Update
Bradi1g61190 No alias expansin A15 0.03 Orthogroups_2024-Update
Bradi3g09950 No alias expansin 11 0.06 Orthogroups_2024-Update
Bradi5g04120 No alias expansin 11 0.03 Orthogroups_2024-Update
Brara.C00061.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.D00393.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.E00745.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.F03107.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.K01453.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
GRMZM2G073373 No alias expansin 11 0.03 Orthogroups_2024-Update
GRMZM2G105844 No alias expansin A1 0.02 Orthogroups_2024-Update
Glyma.07G229000 No alias expansin A15 0.03 Orthogroups_2024-Update
Glyma.15G037700 No alias expansin A4 0.05 Orthogroups_2024-Update
Glyma.18G265400 No alias expansin A23 0.04 Orthogroups_2024-Update
LOC_Os01g14650 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g06000 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_100868g0010 No alias (at2g40610 : 292.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
MA_10377235g0010 No alias (at2g40610 : 412.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
MA_10425823g0010 No alias (q852a1|expa7_orysa : 372.0) Expansin-A7 precursor... 0.03 Orthogroups_2024-Update
MA_114349g0010 No alias (at1g26770 : 288.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
MA_30127g0010 No alias (at2g40610 : 411.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
MA_316222g0010 No alias (at2g40610 : 383.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
MA_40671g0010 No alias (q40636|expa2_orysa : 346.0) Expansin-A2 precursor... 0.03 Orthogroups_2024-Update
MA_4979g0010 No alias (q40636|expa2_orysa : 406.0) Expansin-A2 precursor... 0.03 Orthogroups_2024-Update
MA_75790g0010 No alias (at5g05290 : 306.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
MA_792493g0010 No alias (at1g69530 : 351.0) Member of Alpha-Expansin Gene... 0.05 Orthogroups_2024-Update
Mp1g22730.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Mp3g10160.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00009798-RA No alias (at1g69530 : 350.0) Member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00011355-RA No alias (at2g40610 : 387.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00014026-RA No alias (at1g69530 : 221.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00018428-RA No alias (q40636|expa2_orysa : 402.0) Expansin-A2 precursor... 0.05 Orthogroups_2024-Update
PSME_00018430-RA No alias (at2g40610 : 404.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00025836-RA No alias (at2g40610 : 399.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00029310-RA No alias (at1g26770 : 386.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
PSME_00045415-RA No alias (at4g01630 : 291.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00050247-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00051669-RA No alias (at2g40610 : 425.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00051759-RA No alias (at2g40610 : 368.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00052085-RA No alias (at1g69530 : 372.0) Member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
PSME_00055878-RA No alias (at5g02260 : 159.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Potri.001G240900 No alias expansin A4 0.03 Orthogroups_2024-Update
Potri.001G401700 No alias expansin 12 0.03 Orthogroups_2024-Update
Potri.004G123200 No alias expansin A1 0.02 Orthogroups_2024-Update
Potri.005G244100 No alias expansin 11 0.03 Orthogroups_2024-Update
Potri.006G086100 No alias Barwin-like endoglucanases superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G098700 No alias Barwin-like endoglucanases superfamily protein 0.05 Orthogroups_2024-Update
Pp1s11_29V6 No alias expansin 2 0.03 Orthogroups_2024-Update
Pp1s246_53V6 No alias alpha-expansin 1 0.02 Orthogroups_2024-Update
Pp1s266_66V6 No alias alpha expansin xpa5 0.02 Orthogroups_2024-Update
Pp1s363_2V6 No alias expansin 2 0.02 Orthogroups_2024-Update
Pp1s363_43V6 No alias alpha-expansin 1 0.03 Orthogroups_2024-Update
Seita.6G086300.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.001G033300.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.001G314600.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Sobic.003G338801.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.003G444400.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Sobic.004G238801.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.009G173700.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.010G006200.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Solyc03g115270 No alias Expansin (AHRD V3.3 *** Q76HY8_MALDO) 0.02 Orthogroups_2024-Update
Sopen03g034340 No alias Pollen allergen 0.03 Orthogroups_2024-Update
Sopen06g032650 No alias Pollen allergen 0.03 Orthogroups_2024-Update
Sopen08g003710 No alias Rare lipoprotein A (RlpA)-like double-psi beta-barrel 0.02 Orthogroups_2024-Update
Sopen10g035900 No alias Pollen allergen 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 64 149
IPR007117 Expansin_CBD 160 237
No external refs found!