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  5. Solyc01g080050

Solyc01g080050


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G06120.1)


Gene families : OG_42_0000286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000286_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g080050
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
Brara.G02363.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J00829.1 No alias regulatory protein *(SPCH) of asymmetric cell division &... 0.03 Orthogroups_2024-Update
Sobic.006G197400.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Sopen08g025340 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 2 49
No external refs found!