LOC_Os01g60790

Description : 40S ribosomal protein S26, putative, expressed

Gene families : OG_42_0002386 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002386_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os01g60790
Cluster	HCCA clusters: cluster_0084

Target	Alias	Description	ECC score	Gene Family Method
77589	No alias	Ribosomal protein S26e family protein	0.04	Orthogroups_2024-Update
At3g56340	No alias	40S ribosomal protein S26...	0.04	Orthogroups_2024-Update
Bradi1g04070	No alias	Ribosomal protein S26e family protein	0.05	Orthogroups_2024-Update
Bradi2g53590	No alias	Ribosomal protein S26e family protein	0.04	Orthogroups_2024-Update
Brara.C02079.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Brara.D00349.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Brara.D02473.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Brara.G01691.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Brara.I03875.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Cre16.g682300	No alias	Ribosomal protein S26e family protein	0.05	Orthogroups_2024-Update
GRMZM5G827266	No alias	Ribosomal protein S26e family protein	0.03	Orthogroups_2024-Update
GRMZM5G899149	No alias	Ribosomal protein S26e family protein	0.04	Orthogroups_2024-Update
Glyma.14G208600	No alias	Ribosomal protein S26e family protein	0.05	Orthogroups_2024-Update
HORVU5Hr1G111820.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Mp2g06210.1	No alias	component RPS26 of SSU proteome	0.03	Orthogroups_2024-Update
Potri.013G093700	No alias	Ribosomal protein S26e family protein	0.03	Orthogroups_2024-Update
Potri.019G057000	No alias	Ribosomal protein S26e family protein	0.04	Orthogroups_2024-Update
Pp1s169_19V6	No alias	40s ribosomal protein s26	0.04	Orthogroups_2024-Update
Pp1s270_77V6	No alias	40s ribosomal protein s26	0.08	Orthogroups_2024-Update
Pp1s375_10V6	No alias	40s ribosomal protein s26	0.04	Orthogroups_2024-Update
Seita.3G205000.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Seita.9G038300.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Sobic.001G039400.2	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Sobic.009G173500.1	No alias	component *(eS26) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Solyc04g008810	No alias	40S ribosomal S26-like protein (AHRD V3.3 *** I3S2G2_MEDTR)	0.07	Orthogroups_2024-Update
Solyc06g007470	No alias	40S ribosomal S26-like protein (AHRD V3.3 *** I3S2G2_MEDTR)	0.07	Orthogroups_2024-Update
Sopen04g003990	No alias	Ribosomal protein S26e	0.04	Orthogroups_2024-Update
Sopen06g002380	No alias	Ribosomal protein S26e	0.02	Orthogroups_2024-Update
evm.model.contig_2478.1	No alias	(at3g56340 : 94.4) Ribosomal protein S26e family...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000045	autophagosome assembly	IEP	Predicted GO
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Predicted GO
MF	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	IEP	Predicted GO
MF	GO:0004664	prephenate dehydratase activity	IEP	Predicted GO
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predicted GO
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Predicted GO
BP	GO:0007033	vacuole organization	IEP	Predicted GO
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Predicted GO
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
BP	GO:0009767	photosynthetic electron transport chain	IEP	Predicted GO
BP	GO:0016192	vesicle-mediated transport	IEP	Predicted GO
BP	GO:0017144	drug metabolic process	IEP	Predicted GO
BP	GO:0019725	cellular homeostasis	IEP	Predicted GO
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Predicted GO
CC	GO:0030120	vesicle coat	IEP	Predicted GO
CC	GO:0030127	COPII vesicle coat	IEP	Predicted GO
BP	GO:0042592	homeostatic process	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044455	mitochondrial membrane part	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
BP	GO:0045454	cell redox homeostasis	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO
BP	GO:0070925	organelle assembly	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:0098798	mitochondrial protein complex	IEP	Predicted GO
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predicted GO
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predicted GO
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:1905037	autophagosome organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000892	Ribosomal_S26e	1	106

External Links

No external refs found!

LOC_Os01g60790

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation