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  5. LOC_Os01g61100

LOC_Os01g61100


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g61100
Cluster HCCA clusters: cluster_0121

Target Alias Description ECC score Gene Family Method Actions
Bradi1g72196 No alias FAR1-related sequence 5 0.01 Orthogroups_2024-Update
Brara.C02013.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Brara.H01299.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.10G259000 No alias FRS (FAR1 Related Sequences) transcription factor family 0.02 Orthogroups_2024-Update
HORVU4Hr1G077050.6 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g33750 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g25100 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g37630 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Potri.016G007300 No alias FAR1-related sequence 10 0.02 Orthogroups_2024-Update
Sobic.010G181200.1 No alias FRS/FRF-type transcription factor 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 752 786
IPR018289 MULE_transposase_dom 468 560
No external refs found!