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  5. LOC_Os01g62060

LOC_Os01g62060


Description : plant-specific domain TIGR01589 family protein, expressed


Gene families : OG_42_0001173 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001173_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g62060
Cluster HCCA clusters: cluster_0049

Target Alias Description ECC score Gene Family Method Actions
A4A49_15333 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Brara.C00079.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.E00626.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I03779.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.02G095700 No alias Plant protein 1589 of unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G071910.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G058560.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os05g38680 No alias plant-specific domain TIGR01589 family protein, expressed 0.02 Orthogroups_2024-Update
Seita.5G374200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G165200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc10g084600 No alias Plant protein 1589 of unknown function (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen04g005470 No alias Plant protein 1589 of unknown function (A_thal_3526) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006476 CHP01589_pln 21 72
No external refs found!