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  5. LOC_Os01g62480

LOC_Os01g62480


Description : laccase precursor protein, putative, expressed


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g62480
Cluster HCCA clusters: cluster_0039

Target Alias Description ECC score Gene Family Method Actions
A4A49_05486 No alias laccase-17 0.02 Orthogroups_2024-Update
A4A49_18568 No alias laccase-4 0.03 Orthogroups_2024-Update
At5g09360 No alias Laccase-14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY79] 0.02 Orthogroups_2024-Update
GRMZM2G072808 No alias laccase 17 0.03 Orthogroups_2024-Update
GRMZM2G309594 No alias laccase 7 0.02 Orthogroups_2024-Update
Glyma.02G261600 No alias laccase 5 0.02 Orthogroups_2024-Update
Glyma.03G073778 No alias laccase 7 0.03 Orthogroups_2024-Update
Glyma.14G062300 No alias Laccase/Diphenol oxidase family protein 0.02 Orthogroups_2024-Update
MA_10434864g0010 No alias (at5g05390 : 651.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
MA_192698g0010 No alias (at5g05390 : 734.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
MA_812936g0010 No alias (at5g05390 : 539.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00005164-RA No alias (at5g05390 : 649.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00008221-RA No alias (at5g05390 : 632.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
Seita.4G282400.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Sobic.003G352700.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Sobic.008G090800.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Solyc06g076330 No alias Laccase (AHRD V3.3 *** M1CZK5_SOLTU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_3 37 150
IPR001117 Cu-oxidase 163 315
IPR011706 Cu-oxidase_2 443 561
No external refs found!