LOC_Os01g62514

Description : WRKY56, expressed

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os01g62514
Cluster	HCCA clusters: cluster_0117

Target	Alias	Description	ECC score	Gene Family Method
29146	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
56793	No alias	WRKY family transcription factor family protein	0.02	Orthogroups_2024-Update
At4g26640	No alias	Probable WRKY transcription factor 20...	0.02	Orthogroups_2024-Update
At5g22570	No alias	Probable WRKY transcription factor 38...	0.04	Orthogroups_2024-Update
Bradi2g05500	No alias	WRKY DNA-binding protein 61	0.03	Orthogroups_2024-Update
Bradi2g18530	No alias	WRKY DNA-binding protein 51	0.02	Orthogroups_2024-Update
Bradi2g45480	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi3g34850	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Brara.A03925.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G02914.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G03696.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H02398.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I02227.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G005207	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Glyma.02G285900	No alias	WRKY DNA-binding protein 28	0.03	Orthogroups_2024-Update
HORVU0Hr1G003340.8	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU1Hr1G051260.2	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU1Hr1G092130.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU2Hr1G001780.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU3Hr1G088200.5	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU7Hr1G113850.4	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os01g09080	No alias	WRKY107, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g16510	No alias	WRKY74, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g42850	No alias	WRKY2, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g29870	No alias	WRKY72, expressed	0.03	Orthogroups_2024-Update
MA_103616g0010	No alias	(at4g22070 : 256.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
MA_934202g0010	No alias	(at1g62300 : 149.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00010717-RA	No alias	(at4g22070 : 177.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00012259-RA	No alias	(at1g62300 : 138.0) Encodes a transcription factor...	0.02	Orthogroups_2024-Update
PSME_00040311-RA	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00046716-RA	No alias	(at4g01720 : 148.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00047222-RA	No alias	(at4g04450 : 178.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Potri.002G193000	No alias	WRKY DNA-binding protein 23	0.02	Orthogroups_2024-Update
Potri.015G099200	No alias	WRKY DNA-binding protein 75	0.02	Orthogroups_2024-Update
Seita.3G108500.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.3G143400.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G132700.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G361700.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G005600.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G083000.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Sobic.002G242500.2	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
Sobic.003G200700.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G206800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc05g015850	No alias	WRKY transcription factor 75	0.02	Orthogroups_2024-Update
Solyc06g070990	No alias	WRKY transcription factor 74	0.02	Orthogroups_2024-Update
Solyc07g055280	No alias	WRKY transcription factor 78	0.03	Orthogroups_2024-Update
Solyc07g066220	No alias	WRKY transcription factor 2	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:0001932	regulation of protein phosphorylation	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predicted GO
MF	GO:0019900	kinase binding	IEP	Predicted GO
MF	GO:0019901	protein kinase binding	IEP	Predicted GO
BP	GO:0031399	regulation of protein modification process	IEP	Predicted GO
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0042325	regulation of phosphorylation	IEP	Predicted GO
BP	GO:0043549	regulation of kinase activity	IEP	Predicted GO
BP	GO:0045859	regulation of protein kinase activity	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predicted GO
BP	GO:0051246	regulation of protein metabolic process	IEP	Predicted GO
BP	GO:0051338	regulation of transferase activity	IEP	Predicted GO
BP	GO:0051726	regulation of cell cycle	IEP	Predicted GO
BP	GO:0065009	regulation of molecular function	IEP	Predicted GO
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	166	186

External Links

No external refs found!

LOC_Os01g62514

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation