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LOC_Os01g62990


Description : ATROPGEF7/ROPGEF7, putative, expressed


Gene families : OG_42_0000202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g62990
Cluster HCCA clusters: cluster_0022

Target Alias Description ECC score Gene Family Method Actions
At1g79860 No alias Rop guanine nucleotide exchange factor 12... 0.02 Orthogroups_2024-Update
Glyma.01G105900 No alias RHO guanyl-nucleotide exchange factor 7 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005512 PRONE_dom 73 442
No external refs found!