1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g64090

LOC_Os01g64090


Description : L1P family of ribosomal proteins domain containing protein, expressed


Gene families : OG_42_0001635 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001635_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g64090
Cluster HCCA clusters: cluster_0075

Target Alias Description ECC score Gene Family Method Actions
A4A49_21782 No alias 60s ribosomal protein l10a-1 0.03 Orthogroups_2024-Update
Bradi2g55600 No alias Ribosomal protein L1p/L10e family 0.02 Orthogroups_2024-Update
Bradi3g42800 No alias Ribosomal protein L1p/L10e family 0.02 Orthogroups_2024-Update
Brara.C01003.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.D01641.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.G01318.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Glyma.13G316400 No alias Ribosomal protein L1p/L10e family 0.03 Orthogroups_2024-Update
Glyma.18G026100 No alias Ribosomal protein L1p/L10e family 0.04 Orthogroups_2024-Update
HORVU7Hr1G059090.5 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
MA_71921g0010 No alias (at1g08360 : 345.0) Ribosomal protein L1p/L10e family;... 0.05 Orthogroups_2024-Update
Pp1s18_121V6 No alias 60s ribosomal protein l10a-1 0.04 Orthogroups_2024-Update
Pp1s40_297V6 No alias 60s ribosomal protein l10a-1 0.02 Orthogroups_2024-Update
Sobic.003G363800.2 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sopen01g005070 No alias Ribosomal protein L1p/L10e family 0.05 Orthogroups_2024-Update
Sopen06g030750 No alias Ribosomal protein L1p/L10e family 0.02 Orthogroups_2024-Update
Sopen11g027130 No alias Ribosomal protein L1p/L10e family 0.02 Orthogroups_2024-Update
evm.model.contig_2315.2 No alias (at2g27530 : 237.0) Encodes ribosomal protein L10aP.... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 23 133
IPR028364 Ribosomal_L1/biogenesis 149 232
No external refs found!