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  5. LOC_Os01g64200

LOC_Os01g64200


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os01g64200
Cluster HCCA clusters: cluster_0086

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G000400 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
LOC_Os04g25100 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Potri.008G108800 No alias FAR1-related sequence 11 0.03 Orthogroups_2024-Update
Sobic.001G149000.2 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 307 398
IPR007527 Znf_SWIM 600 620
No external refs found!