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  5. Solyc07g021240

Solyc07g021240


Description : Photosystem I P700 chlorophyll A apoprotein (AHRD V3.3 *-* C7U1R7_9ASPA)


Gene families : OG_42_0000633 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000633_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g021240
Cluster HCCA clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Bradi1g39223 No alias Photosystem I, PsaA/PsaB protein 0.03 Orthogroups_2024-Update
Brara.A02576.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G038010.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G064630.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Mp3g20630.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.02 Orthogroups_2024-Update
PSME_00007865-RA No alias (p41640|psab_pinth : 787.0) Photosystem I P700... 0.03 Orthogroups_2024-Update
PSME_00023812-RA No alias (p58386|psab_wheat : 347.0) Photosystem I P700... 0.03 Orthogroups_2024-Update
Potri.003G065200 No alias Photosystem I, PsaA/PsaB protein 0.03 Orthogroups_2024-Update
Potri.013G141800 No alias Photosystem I, PsaA/PsaB protein 0.03 Orthogroups_2024-Update
Potri.017G052700 No alias Photosystem I, PsaA/PsaB protein 0.05 Orthogroups_2024-Update
Potri.019G028100 No alias Photosystem I, PsaA/PsaB protein 0.03 Orthogroups_2024-Update
Pp1s143_15V6 No alias psi p700 apoprotein a2 0.03 Orthogroups_2024-Update
Seita.J011100.1 No alias apoprotein PsaA of PS-I complex 0.04 Orthogroups_2024-Update
Seita.J019800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.J019900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G120266.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc10g052740 No alias LOW QUALITY:Photosystem I P700 chlorophyll a apoprotein... 0.03 Orthogroups_2024-Update
Solyc12g035730 No alias LOW QUALITY:Photosystem I P700 chlorophyll a apoprotein... 0.03 Orthogroups_2024-Update
Sopen10g009190 No alias Photosystem I psaA/psaB protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009579 thylakoid IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 1 108
IPR001280 PSI_PsaA/B 117 146
No external refs found!