1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g68490

LOC_Os01g68490


Description : tetratricopeptide-like helical, putative, expressed


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g68490
Cluster HCCA clusters: cluster_0140

Target Alias Description ECC score Gene Family Method Actions
111767 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
93702 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
At1g03540 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.05 Orthogroups_2024-Update
At4g21300 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.02 Orthogroups_2024-Update
Brara.F00971.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G030148 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G045154 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G011700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G159100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G203500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G068600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G213800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G163300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G001760.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G015010.23 No alias RNA editing factor *(MEF12) 0.02 Orthogroups_2024-Update
HORVU3Hr1G061600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G080810.1 No alias RNA editing factor *(MEF10) 0.02 Orthogroups_2024-Update
HORVU7Hr1G038460.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os09g38310 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00026226-RA No alias (at3g46790 : 588.0) Encodes a member of a PCMP (plant... 0.04 Orthogroups_2024-Update
PSME_00032006-RA No alias (at2g13600 : 367.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00043165-RA No alias (at3g13770 : 384.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00044871-RA No alias (at2g39620 : 426.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00045505-RA No alias (at2g22070 : 613.0) pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00046347-RA No alias (at2g13600 : 438.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00048766-RA No alias (at4g02750 : 577.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00057248-RA No alias (at1g11290 : 733.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
Potri.010G168800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G241100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G097000 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
Seita.1G215700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G213100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g096610 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc07g008480 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc08g023640 No alias Pentatricopeptide repeat-containing protein family (AHRD... 0.02 Orthogroups_2024-Update
Solyc12g096510 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g096680 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 239 285
IPR002885 Pentatricopeptide_repeat 340 388
IPR002885 Pentatricopeptide_repeat 209 236
IPR002885 Pentatricopeptide_repeat 180 208
IPR002885 Pentatricopeptide_repeat 315 337
IPR002885 Pentatricopeptide_repeat 416 439
IPR002885 Pentatricopeptide_repeat 149 176
No external refs found!