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  5. LOC_Os01g69950

LOC_Os01g69950


Description : ribosomal protein L27, putative, expressed


Gene families : OG_42_0002035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002035_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os01g69950
Cluster HCCA clusters: cluster_0048

Target Alias Description ECC score Gene Family Method Actions
Cre06.g300800 No alias ribosomal protein large subunit 27 0.03 Orthogroups_2024-Update
Kfl00287_0170 kfl00287_0170_v1.1 (p30155|rk27_tobac : 140.0) 50S ribosomal protein L27,... 0.04 Orthogroups_2024-Update
Pp1s167_18V6 No alias ribosomal protein l27 0.03 Orthogroups_2024-Update
Pp1s19_202V6 No alias ribosomal protein l27 0.03 Orthogroups_2024-Update
Seita.5G433600.1 No alias component *(bL27c) of large plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Sobic.003G408000.2 No alias component *(bL27c) of large plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 61 140
No external refs found!