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  5. LOC_Os01g69980

LOC_Os01g69980


Description : TCP family transcription factor, putative, expressed


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g69980
Cluster HCCA clusters: cluster_0040

Target Alias Description ECC score Gene Family Method Actions
A4A49_06505 No alias transcription factor tcp14 0.02 Orthogroups_2024-Update
GRMZM2G113888 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.02 Orthogroups_2024-Update
Glyma.17G099100 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 Orthogroups_2024-Update
HORVU5Hr1G117990.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Potri.002G152200 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Potri.016G094800 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.02 Orthogroups_2024-Update
Sobic.003G408400.1 No alias circadian clock activation factor *(TCP20) & TCP-type... 0.02 Orthogroups_2024-Update
Solyc02g094290 No alias TCP transcription factor 27 0.03 Orthogroups_2024-Update
Solyc05g007420 No alias TCP transcription factor 23 0.03 Orthogroups_2024-Update
Solyc11g020670 No alias TCP transcription factor 12 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
CC GO:0000814 ESCRT II complex IEP Predicted GO
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 86 172
No external refs found!