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  5. LOC_Os01g71340

LOC_Os01g71340


Description : glycosyl hydrolases family 17, putative, expressed


Gene families : OG_42_0000200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g71340
Cluster HCCA clusters: cluster_0044

Target Alias Description ECC score Gene Family Method Actions
A4A49_28305 No alias glucan endo-1,3-beta-glucosidase, basic vacuolar isoform ggib50 0.03 Orthogroups_2024-Update
Bradi2g43056 No alias beta-1,3-glucanase 1 0.03 Orthogroups_2024-Update
Bradi2g60490 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Brara.B00880.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Glyma.19G134700 No alias beta-1,3-glucanase 1 0.02 Orthogroups_2024-Update
HORVU3Hr1G105630.7 No alias EC_3.2 glycosylase 0.01 Orthogroups_2024-Update
LOC_Os01g71930 No alias glycosyl hydrolases family 17 protein, expressed 0.02 Orthogroups_2024-Update
MA_10266495g0010 No alias (p07979|gub_nicpl : 308.0) Lichenase precursor (EC... 0.02 Orthogroups_2024-Update
MA_10337257g0010 No alias (p49237|e13b_maize : 232.0) Glucan... 0.03 Orthogroups_2024-Update
MA_475809g0010 No alias (at4g16260 : 249.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
Mp2g14720.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Orthogroups_2024-Update
PSME_00010153-RA No alias (p15797|e13b_tobac : 286.0) Glucan... 0.02 Orthogroups_2024-Update
PSME_00017374-RA No alias (p49237|e13b_maize : 292.0) Glucan... 0.03 Orthogroups_2024-Update
PSME_00017375-RA No alias (p23546|e13e_tobac : 273.0) Glucan... 0.02 Orthogroups_2024-Update
PSME_00019982-RA No alias (p07979|gub_nicpl : 308.0) Lichenase precursor (EC... 0.02 Orthogroups_2024-Update
PSME_00023819-RA No alias (p52408|e13b_prupe : 305.0) Glucan... 0.02 Orthogroups_2024-Update
PSME_00025205-RA No alias (p49237|e13b_maize : 286.0) Glucan... 0.03 Orthogroups_2024-Update
PSME_00037375-RA No alias (p49237|e13b_maize : 314.0) Glucan... 0.03 Orthogroups_2024-Update
Seita.5G448500.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.003G421700.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.003G422000.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.003G422100.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.008G146700.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.009G119400.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Sobic.009G183400.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Solyc01g059980 No alias Beta-1,3-glucanase (AHRD V3.3 *** G9G7S0_HEVBR) 0.04 Orthogroups_2024-Update
Solyc01g060020 No alias beta-1,3-glucanase TOMB13GLUB 0.04 Orthogroups_2024-Update
Solyc11g065280 No alias beta-1,3-glucanase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 28 330
No external refs found!