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  5. LOC_Os01g71850

LOC_Os01g71850


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g71850
Cluster HCCA clusters: cluster_0027

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G121700 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
HORVU2Hr1G063550.3 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G020290.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os03g45300 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g32140 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Potri.009G170100 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Potri.016G018100 No alias FAR1-related sequence 2 0.03 Orthogroups_2024-Update
Potri.016G059200 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Seita.2G152300.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 559 651
IPR004330 FAR1_DNA_bnd_dom 342 437
No external refs found!