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  5. LOC_Os01g72540

LOC_Os01g72540


Description : OsCML23 - Calmodulin-related calcium sensor protein, expressed


Gene families : OG_42_0001705 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g72540
Cluster HCCA clusters: cluster_0068

Target Alias Description ECC score Gene Family Method Actions
Bradi2g61150 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Potri.005G259900 No alias calmodulin-like 38 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 101 149
IPR002048 EF_hand_dom 7 68
No external refs found!