LOC_Os01g72680

Description : disease resistance protein RPS2, putative, expressed

Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os01g72680
Cluster	HCCA clusters: cluster_0035

Target	Alias	Description	ECC score	Gene Family Method
At4g27190	No alias	Disease resistance protein At4g27190...	0.02	Orthogroups_2024-Update
Brara.F00866.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Glyma.12G236500	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
LOC_Os03g10910	No alias	NB-ARC/LRR disease resistance protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_322817g0010	No alias	(at1g61190 : 221.0) LRR and NB-ARC domains-containing...	0.02	Orthogroups_2024-Update
MA_8325275g0010	No alias	(at1g12220 : 93.2) Resistance gene, mediates resistance...	0.02	Orthogroups_2024-Update
PSME_00034037-RA	No alias	(at1g12210 : 130.0) RFL1 has high sequence similarity to...	0.03	Orthogroups_2024-Update
PSME_00056526-RA	No alias	(at1g12220 : 198.0) Resistance gene, mediates resistance...	0.02	Orthogroups_2024-Update
Potri.T014700	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Predicted GO
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predicted GO
BP	GO:0006595	polyamine metabolic process	IEP	Predicted GO
BP	GO:0006596	polyamine biosynthetic process	IEP	Predicted GO
BP	GO:0006597	spermine biosynthetic process	IEP	Predicted GO
BP	GO:0008215	spermine metabolic process	IEP	Predicted GO
BP	GO:0008216	spermidine metabolic process	IEP	Predicted GO
BP	GO:0008295	spermidine biosynthetic process	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
BP	GO:0044106	cellular amine metabolic process	IEP	Predicted GO
BP	GO:0097164	ammonium ion metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	123	365

External Links

No external refs found!