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  5. LOC_Os01g72950

LOC_Os01g72950


Description : expressed protein


Gene families : OG_42_0009631 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g72950
Cluster HCCA clusters: cluster_0112

Target Alias Description ECC score Gene Family Method Actions
Bradi2g61410 No alias NAD(P)H:plastoquinone dehydrogenase complex subunit O 0.04 Orthogroups_2024-Update
Kfl00414_0120 kfl00414_0120_v1.1 (at1g74880 : 114.0) Encodes subunit NDH-O of... 0.01 Orthogroups_2024-Update
Mp4g21490.1 No alias component NdhO of NDH subcomplex A 0.02 Orthogroups_2024-Update
Sobic.003G433900.1 No alias component *(NdhO) of NDH subcomplex A 0.04 Orthogroups_2024-Update
Solyc11g006020 No alias NADH dehydrogenase-like complex O (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEA InterProScan predictions
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR020905 NdhO 81 155
No external refs found!