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  5. LOC_Os01g73690

LOC_Os01g73690


Description : pentatricopeptide, putative, expressed


Gene families : OG_42_0001772 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001772_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g73690
Cluster HCCA clusters: cluster_0048

Target Alias Description ECC score Gene Family Method Actions
PSME_00005312-RA No alias (at2g32230 : 444.0) RNase P able to cleave tRNA-like... 0.03 Orthogroups_2024-Update
PSME_00024601-RA No alias (at2g32230 : 293.0) RNase P able to cleave tRNA-like... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR031595 PRORP_C 270 496
IPR033443 PPR_long 14 228
No external refs found!