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  5. LOC_Os01g74410

LOC_Os01g74410


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g74410
Cluster HCCA clusters: cluster_0107

Target Alias Description ECC score Gene Family Method Actions
84369 No alias myb domain protein 97 0.02 Orthogroups_2024-Update
At2g32460 No alias Transcription factor MYB101... 0.03 Orthogroups_2024-Update
Bradi2g36730 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
Brara.B00668.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.B01071.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.H01853.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Brara.H02857.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G057027 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
GRMZM2G064744 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
GRMZM2G425427 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
GRMZM2G496770 No alias myb domain protein 19 0.03 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.15G066800 No alias MYB-like 102 0.02 Orthogroups_2024-Update
Glyma.20G158100 No alias myb domain protein 17 0.01 Orthogroups_2024-Update
HORVU1Hr1G074260.1 No alias MYB class-R2R3 subgroup-4 transcription factor & MYB... 0.02 Orthogroups_2024-Update
PSME_00010370-RA No alias (at5g62470 : 192.0) Encodes a R2R3 type Myb... 0.02 Orthogroups_2024-Update
PSME_00020880-RA No alias (at1g66230 : 247.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00042064-RA No alias (p20026|myb1_horvu : 274.0) Myb-related protein Hv1 -... 0.01 Orthogroups_2024-Update
PSME_00043807-RA No alias (at1g09540 : 265.0) Encodes putative transcription... 0.02 Orthogroups_2024-Update
PSME_00050855-RA No alias "(at2g47460 : 188.0) ""MYB12 belongs to subgroup 7 of... 0.02 Orthogroups_2024-Update
PSME_00051920-RA No alias (at5g57620 : 234.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00052797-RA No alias (at3g13890 : 180.0) Encodes a putative transcription... 0.01 Orthogroups_2024-Update
Potri.008G173400 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Potri.017G128900 No alias myb domain protein 6 0.02 Orthogroups_2024-Update
Potri.019G118900 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Pp1s433_19V6 No alias myb-related transcription factor 0.02 Orthogroups_2024-Update
Pp1s6_416V6 No alias myb transcription factor 0.01 Orthogroups_2024-Update
Seita.2G204300.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.01 Orthogroups_2024-Update
Seita.5G135700.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Seita.5G398000.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.01 Orthogroups_2024-Update
Seita.6G239700.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G030000.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G201000.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G177100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G020300.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Solyc01g079620 No alias colorless fruit epidermis 0.02 Orthogroups_2024-Update
Solyc05g008250 No alias R2R3MYB transcription factor 76 0.02 Orthogroups_2024-Update
Sopen05g003570 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 58 105
IPR001005 SANT/Myb 111 156
No external refs found!