LOC_Os02g01610

Description : pentatricopeptide, putative, expressed

Gene families : OG_42_0009630 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009630_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g01610
Cluster	HCCA clusters: cluster_0027

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0005991	trehalose metabolic process	IEP	Predicted GO
BP	GO:0005992	trehalose biosynthetic process	IEP	Predicted GO
MF	GO:0008483	transaminase activity	IEP	Predicted GO
MF	GO:0010181	FMN binding	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Predicted GO
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	111	138
IPR002885	Pentatricopeptide_repeat	518	543
IPR002885	Pentatricopeptide_repeat	213	241
IPR002885	Pentatricopeptide_repeat	418	440
IPR002885	Pentatricopeptide_repeat	52	75
IPR002885	Pentatricopeptide_repeat	81	108
IPR002885	Pentatricopeptide_repeat	187	210
IPR002885	Pentatricopeptide_repeat	343	390
IPR002885	Pentatricopeptide_repeat	242	288
IPR002885	Pentatricopeptide_repeat	444	491
IPR032867	DYW_dom	617	740

External Links

No external refs found!