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  5. LOC_Os02g03380

LOC_Os02g03380


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os02g03380
Cluster HCCA clusters: cluster_0019

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g34740 No alias retrotransposon protein, putative, unclassified, expressed 0.04 Orthogroups_2024-Update
LOC_Os05g26060 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Seita.9G135500.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 145 229
No external refs found!