1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g05340

LOC_Os02g05340


Description : proteasome/cyclosome repeat containing protein, expressed


Gene families : OG_42_0003516 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003516_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g05340
Cluster HCCA clusters: cluster_0126

Target Alias Description ECC score Gene Family Method Actions
Brara.A00873.1 No alias regulatory component *(RPN1) of 26S proteasome 0.02 Orthogroups_2024-Update
Cre16.g676197 No alias 26S proteasome regulatory subunit S2 1B 0.01 Orthogroups_2024-Update
Seita.1G089700.1 No alias regulatory component *(RPN1) of 26S proteasome 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002015 Proteasome/cyclosome_rpt 491 521
IPR002015 Proteasome/cyclosome_rpt 454 489
No external refs found!