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  5. LOC_Os02g06580

LOC_Os02g06580


Description : formin, putative, expressed


Gene families : OG_42_0000265 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g06580
Cluster HCCA clusters: cluster_0100

Target Alias Description ECC score Gene Family Method Actions
A4A49_02067 No alias formin-like protein 5 0.03 Orthogroups_2024-Update
A4A49_27317 No alias formin-like protein 5 0.03 Orthogroups_2024-Update
Brara.E03364.1 No alias group-I formin actin filament elongation factor 0.03 Orthogroups_2024-Update
Glyma.06G266000 No alias formin homology5 0.02 Orthogroups_2024-Update
Glyma.11G048600 No alias formin homolog 6 0.03 Orthogroups_2024-Update
Glyma.19G234000 No alias Actin-binding FH2 (formin homology 2) family protein 0.02 Orthogroups_2024-Update
Potri.002G240166 No alias formin homology 1 0.03 Orthogroups_2024-Update
Potri.005G026300 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 Orthogroups_2024-Update
Potri.007G119900 No alias formin 3 0.02 Orthogroups_2024-Update
Sopen05g002360 No alias Formin Homology 2 Domain 0.03 Orthogroups_2024-Update
Sopen08g005420 No alias Formin Homology 2 Domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR015425 FH2_Formin 425 828
No external refs found!