LOC_Os02g07310

Description : argonaute, putative, expressed

Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g07310
Cluster	HCCA clusters: cluster_0026

Target	Alias	Description	ECC score	Gene Family Method
HORVU3Hr1G021290.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G053700.2	No alias	Unknown function	0.02	Orthogroups_2024-Update
evm.model.contig_2082.8	No alias	(at1g48410 : 352.0) Encodes an RNA Slicer that...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Predicted GO
BP	GO:0006260	DNA replication	IEP	Predicted GO
MF	GO:1990380	Lys48-specific deubiquitinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR014811	ArgoL1	197	243
IPR032474	Argonaute_N	47	183
IPR032472	ArgoL2	364	410
IPR003165	Piwi	515	834

External Links

No external refs found!