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LOC_Os02g08070


Description : OsSPL5 - SBP-box gene family member, expressed


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g08070
Cluster HCCA clusters: cluster_0114

Target Alias Description ECC score Gene Family Method Actions
At2g42200 No alias Squamosa promoter-binding-like protein 9... 0.03 Orthogroups_2024-Update
Cre07.g345050 No alias squamosa promoter binding protein-like 10 0.01 Orthogroups_2024-Update
Pp1s194_61V6 No alias squamosa promoter-binding 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 197 270
No external refs found!