LOC_Os02g08340

Description : transposon protein, putative, unclassified, expressed

Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g08340
Cluster	HCCA clusters: cluster_0021

Target	Alias	Description	ECC score	Gene Family Method
At3g42170	No alias	DAYSLEEPER [Source:UniProtKB/TrEMBL;Acc:A0A178VJS5]	0.02	Orthogroups_2024-Update
HORVU1Hr1G018180.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os01g18650	No alias	transposon protein, putative, unclassified, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g43120	No alias	transposon protein, putative, unclassified, expressed	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	Predicted GO
CC	GO:0031012	extracellular matrix	IEP	Predicted GO
CC	GO:0044421	extracellular region part	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR025525	hAT-like_transposase_RNase-H	528	626
IPR003656	Znf_BED	147	196
IPR008906	HATC_C_dom	640	678

External Links

No external refs found!