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  5. LOC_Os02g08500

LOC_Os02g08500


Description : two-component response regulator, putative, expressed


Gene families : OG_42_0000401 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g08500
Cluster HCCA clusters: cluster_0044

Target Alias Description ECC score Gene Family Method Actions
55684 No alias response regulator 2 0.01 Orthogroups_2024-Update
Bradi3g06120 No alias response regulator 12 0.02 Orthogroups_2024-Update
Potri.008G181000 No alias response regulator 11 0.02 Orthogroups_2024-Update
Potri.012G133800 No alias response regulator 21 0.03 Orthogroups_2024-Update
Seita.1G351300.1 No alias subgroup ARR-B transcription factor & B-type ARR... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 31 140
IPR001005 SANT/Myb 215 265
No external refs found!