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  5. LOC_Os02g09480

LOC_Os02g09480


Description : myb-like DNA-binding domain containing protein, putative, expressed


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g09480
Cluster HCCA clusters: cluster_0016

Target Alias Description ECC score Gene Family Method Actions
A4A49_09539 No alias transcription factor myb44 0.03 Orthogroups_2024-Update
A4A49_10535 No alias myb-related protein 3r-1 0.04 Orthogroups_2024-Update
A4A49_38114 No alias transcription factor myb44 0.03 Orthogroups_2024-Update
At2g13960 No alias At2g13960 [Source:UniProtKB/TrEMBL;Acc:Q29PZ8] 0.02 Orthogroups_2024-Update
At5g39700 No alias Myb domain protein 89 [Source:UniProtKB/TrEMBL;Acc:Q9SPG4] 0.02 Orthogroups_2024-Update
At5g40360 No alias Transcription factor MYB115... 0.02 Orthogroups_2024-Update
Brara.A03573.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.02 Orthogroups_2024-Update
Brara.B02092.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.05 Orthogroups_2024-Update
Brara.G03264.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Brara.J01778.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G093660 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
Glyma.04G036700 No alias myb domain protein 77 0.02 Orthogroups_2024-Update
Glyma.05G038500 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Glyma.11G052100 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
Glyma.19G062000 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
HORVU1Hr1G029540.25 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.03 Orthogroups_2024-Update
HORVU3Hr1G084880.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G025720.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
MA_89683g0010 No alias (at5g67300 : 191.0) Member of the R2R3 factor MYB gene... 0.02 Orthogroups_2024-Update
PSME_00006895-RA No alias (at1g22640 : 178.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
Potri.003G123800 No alias Homeodomain-like protein 0.02 Orthogroups_2024-Update
Potri.007G017700 No alias myb domain protein 98 0.02 Orthogroups_2024-Update
Potri.007G106100 No alias myb domain protein 69 0.02 Orthogroups_2024-Update
Potri.009G096000 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
Potri.017G017600 No alias myb domain protein 52 0.03 Orthogroups_2024-Update
Seita.3G079800.1 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.01 Orthogroups_2024-Update
Sobic.004G070900.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.02 Orthogroups_2024-Update
evm.model.contig_4410.19 No alias (at5g02320 : 122.0) Encodes a putative c-MYB-like... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0004017 adenylate kinase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 11 56
IPR001005 SANT/Myb 63 106
No external refs found!