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  5. LOC_Os02g09790

LOC_Os02g09790


Description : disease resistance protein RPM1, putative, expressed


Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g09790
Cluster HCCA clusters: cluster_0027

Target Alias Description ECC score Gene Family Method Actions
A4A49_41267 No alias disease resistance protein rpp13 0.03 Orthogroups_2024-Update
AC203972.3_FG001 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
At3g46710 No alias Putative disease resistance RPP13-like protein 2... 0.05 Orthogroups_2024-Update
Bradi5g03140 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.08G317400 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.12G011700 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.18G082300 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
Glyma.18G087000 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.18G087700 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.18G093900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.18G287000 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.19G131900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.20G041300 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Orthogroups_2024-Update
HORVU1Hr1G001540.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU1Hr1G001810.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g22460 No alias disease resistance protein RPM1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g12320 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g45330 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G134500 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.002G216800 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.003G099150 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.005G008700 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.005G009100 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.005G034900 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.005G035400 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.018G013500 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.018G138500 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Seita.2G246300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G087300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G089200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G090200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g090430 No alias NRC1 0.03 Orthogroups_2024-Update
Solyc04g009130 No alias Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC) 0.02 Orthogroups_2024-Update
Solyc04g009660 No alias LOW QUALITY:Nbs-lrr resistance protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc04g009690 No alias LOW QUALITY:Nbs-lrr resistance protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc07g039410 No alias EDNR2GH3 protein (AHRD V3.3 *** E0Y3V4_9SOLN) 0.03 Orthogroups_2024-Update
Solyc11g069020 No alias Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 0.02 Orthogroups_2024-Update
Sopen05g005440 No alias NB-ARC domain 0.04 Orthogroups_2024-Update
Sopen11g027730 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006658 phosphatidylserine metabolic process IEP Predicted GO
BP GO:0006659 phosphatidylserine biosynthetic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 177 420
IPR001611 Leu-rich_rpt 602 653
No external refs found!