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Description : zinc finger, C3HC4 type domain containing protein, expressed
Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os02g09820 | |
| Cluster | HCCA clusters: cluster_0033 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_24130 | No alias | e3 ubiquitin-protein ligase ring1-like protein | 0.02 | Orthogroups_2024-Update | |
| At1g14200 | No alias | At1g14200 [Source:UniProtKB/TrEMBL;Acc:Q9XI67] | 0.03 | Orthogroups_2024-Update | |
| At3g13228 | No alias | RING/U-box superfamily protein... | 0.04 | Orthogroups_2024-Update | |
| At3g56580 | No alias | E3 ubiquitin-protein ligase RZF1... | 0.02 | Orthogroups_2024-Update | |
| Bradi1g46110 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi3g37800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.C02094.1 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
| Brara.G02768.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.H02157.1 | No alias | E3 ubiquitin ligase *(SNIPER) | 0.02 | Orthogroups_2024-Update | |
| Brara.I03147.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.I04047.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Cre10.g422050 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
| GRMZM2G157855 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.04G251600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.10G089800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU0Hr1G002870.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os03g26420 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os12g04590 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_79051g0010 | No alias | (at3g19950 : 171.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| MA_816375g0010 | No alias | (at2g40830 : 158.0) Encodes a putative RING-H2 finger... | 0.02 | Orthogroups_2024-Update | |
| Seita.7G317600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.005G165900.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Solyc10g045180 | No alias | E3 ubiquitin-protein ligase (AHRD V3.3 --* A0A0F7G5V7_9ROSI) | 0.02 | Orthogroups_2024-Update | |
| Solyc12g008480 | No alias | RING/U-box superfamily protein (AHRD V3.3 *-* AT1G60360.1) | 0.03 | Orthogroups_2024-Update | |
| Sopen03g029300 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001871 | pattern binding | IEP | Predicted GO |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
| MF | GO:0004568 | chitinase activity | IEP | Predicted GO |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Predicted GO |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Predicted GO |
| BP | GO:0006030 | chitin metabolic process | IEP | Predicted GO |
| BP | GO:0006032 | chitin catabolic process | IEP | Predicted GO |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Predicted GO |
| BP | GO:0006813 | potassium ion transport | IEP | Predicted GO |
| MF | GO:0009678 | hydrogen-translocating pyrophosphatase activity | IEP | Predicted GO |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015672 | monovalent inorganic cation transport | IEP | Predicted GO |
| CC | GO:0016020 | membrane | IEP | Predicted GO |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Predicted GO |
| MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
| BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
| BP | GO:0042737 | drug catabolic process | IEP | Predicted GO |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Predicted GO |
| MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Predicted GO |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Predicted GO |
| BP | GO:0098655 | cation transmembrane transport | IEP | Predicted GO |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Predicted GO |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Predicted GO |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Predicted GO |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Predicted GO |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 275 | 316 |
| No external refs found! |