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  5. LOC_Os02g10840

LOC_Os02g10840


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os02g10840
Cluster HCCA clusters: cluster_0056

Target Alias Description ECC score Gene Family Method Actions
Brara.A02741.1 No alias transcriptional regulator of red/far-red light... 0.02 Orthogroups_2024-Update
Brara.E01132.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.04G193200 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Glyma.05G072100 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Glyma.14G000400 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
LOC_Os11g14020 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Seita.2G152300.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Sopen02g017690 No alias FAR1 DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen03g040440 No alias FAR1 DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 88 174
IPR007527 Znf_SWIM 579 603
IPR018289 MULE_transposase_dom 289 383
No external refs found!