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  5. LOC_Os02g11070

LOC_Os02g11070


Description : 3-ketoacyl-CoA synthase, putative, expressed


Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os02g11070
Cluster HCCA clusters: cluster_0123

Target Alias Description ECC score Gene Family Method Actions
437285 No alias 3-ketoacyl-CoA synthase 11 0.02 Orthogroups_2024-Update
79947 No alias 3-ketoacyl-CoA synthase 4 0.02 Orthogroups_2024-Update
A4A49_32913 No alias 3-ketoacyl-coa synthase 1 0.02 Orthogroups_2024-Update
HORVU4Hr1G063420.2 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
HORVU5Hr1G056870.5 No alias 3-ketoacyl-CoA synthase *(KCS) 0.02 Orthogroups_2024-Update
Kfl00169_0130 kfl00169_0130_v1.... (at1g19440 : 647.0) Encodes KCS4, a member of the... 0.01 Orthogroups_2024-Update
Potri.004G155600 No alias 3-ketoacyl-CoA synthase 4 0.03 Orthogroups_2024-Update
Potri.015G133700 No alias 3-ketoacyl-CoA synthase 6 0.03 Orthogroups_2024-Update
Pp1s7_269V6 No alias beta-ketoacyl-coa synthase family protein 0.02 Orthogroups_2024-Update
Seita.9G263300.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.02 Orthogroups_2024-Update
Sobic.001G264500.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
Sobic.010G108301.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.02 Orthogroups_2024-Update
Sopen02g014210 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update
Sopen05g005020 No alias FAE1/Type III polyketide synthase-like protein 0.03 Orthogroups_2024-Update
Sopen06g024120 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update
Sopen08g021190 No alias FAE1/Type III polyketide synthase-like protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 402 482
IPR013601 FAE1_typ3_polyketide_synth 97 384
No external refs found!