LOC_Os02g15340

Description : no apical meristem protein, putative, expressed

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g15340
Cluster	HCCA clusters: cluster_0107

Target	Alias	Description	ECC score	Gene Family Method
A4A49_58267	No alias	hypothetical protein	0.03	Orthogroups_2024-Update
At5g66300	No alias	NAC domain-containing protein 105...	0.02	Orthogroups_2024-Update
Brara.A03159.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B02268.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.D00978.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G01456.1	No alias	NAC-type transcription factor	0.01	Orthogroups_2024-Update
GRMZM5G898290	No alias	NAC domain containing protein 80	0.03	Orthogroups_2024-Update
Glyma.06G236000	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Glyma.07G050600	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Glyma.09G235700	No alias	NAC domain containing protein 100	0.03	Orthogroups_2024-Update
Glyma.18G261300	No alias	NAC domain containing protein 100	0.02	Orthogroups_2024-Update
Glyma.19G024500	No alias	NAC domain containing protein 100	0.04	Orthogroups_2024-Update
HORVU7Hr1G075550.1	No alias	NAC-type transcription factor & transcriptional...	0.01	Orthogroups_2024-Update
MA_109677g0010	No alias	(at5g61430 : 282.0) NAC domain containing protein 100...	0.02	Orthogroups_2024-Update
MA_15204g0010	No alias	(at3g03200 : 250.0) NAC domain containing protein 45...	0.02	Orthogroups_2024-Update
PSME_00014399-RA	No alias	(at5g53950 : 274.0) Transcriptional activator of the NAC...	0.03	Orthogroups_2024-Update
PSME_00053123-RA	No alias	(at5g53950 : 278.0) Transcriptional activator of the NAC...	0.04	Orthogroups_2024-Update
Potri.008G031800	No alias	NAC domain containing protein 2	0.02	Orthogroups_2024-Update
Potri.011G115400	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Potri.012G001400	No alias	NAC domain containing protein 100	0.03	Orthogroups_2024-Update
Pp1s44_300V6	No alias	nac domain ipr003441	0.02	Orthogroups_2024-Update
Pp1s73_182V6	No alias	nac domain ipr003441	0.02	Orthogroups_2024-Update
Sobic.004G112200.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Solyc03g078120	No alias	NAC domain protein, (AHRD V3.3 - A0A061FNG1_THECC)	0.02	Orthogroups_2024-Update
Solyc03g098190	No alias	NAC domain protein (AHRD V3.3 *** A0A0K9PDJ8_ZOSMR)	0.03	Orthogroups_2024-Update
Solyc08g074300	No alias	NAC domain-containing protein (AHRD V3.3 - I6YR01_9CARY)	0.03	Orthogroups_2024-Update
Solyc11g008000	No alias	NAC domain protein, (AHRD V3.3 *** A0A061FNG1_THECC)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Predicted GO
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Predicted GO
BP	GO:0006541	glutamine metabolic process	IEP	Predicted GO
BP	GO:0006542	glutamine biosynthetic process	IEP	Predicted GO
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
MF	GO:0016211	ammonia ligase activity	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
MF	GO:1990380	Lys48-specific deubiquitinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	11	141

External Links

No external refs found!

LOC_Os02g15340

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation