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  5. LOC_Os02g16540

LOC_Os02g16540


Description : WRKY39, expressed


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g16540
Cluster HCCA clusters: cluster_0129

Target Alias Description ECC score Gene Family Method Actions
29146 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
66769 No alias WRKY family transcription factor family protein 0.02 Orthogroups_2024-Update
A4A49_11091 No alias wrky transcription factor 22 0.03 Orthogroups_2024-Update
A4A49_23174 No alias putative wrky transcription factor 41 0.02 Orthogroups_2024-Update
A4A49_39379 No alias putative wrky transcription factor 3 0.02 Orthogroups_2024-Update
AC165171.2_FG002 No alias WRKY DNA-binding protein 49 0.02 Orthogroups_2024-Update
At1g80590 No alias Probable WRKY transcription factor 66... 0.02 Orthogroups_2024-Update
At2g40740 No alias WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740] 0.02 Orthogroups_2024-Update
At5g07100 No alias Probable WRKY transcription factor 26... 0.04 Orthogroups_2024-Update
At5g46350 No alias Probable WRKY transcription factor 8... 0.02 Orthogroups_2024-Update
Bradi1g08106 No alias WRKY DNA-binding protein 57 0.02 Orthogroups_2024-Update
Bradi1g51030 No alias WRKY DNA-binding protein 72 0.03 Orthogroups_2024-Update
Bradi1g63220 No alias WRKY DNA-binding protein 70 0.03 Orthogroups_2024-Update
Bradi2g11170 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Bradi4g01950 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
Brara.D00225.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.D00345.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D01806.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.D02837.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.E00136.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.F03624.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G02862.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I00520.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.K01698.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G018721 No alias WRKY DNA-binding protein 57 0.04 Orthogroups_2024-Update
GRMZM2G025895 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G106560 No alias WRKY DNA-binding protein 75 0.03 Orthogroups_2024-Update
GRMZM2G304573 No alias WRKY DNA-binding protein 9 0.04 Orthogroups_2024-Update
GRMZM5G871347 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Glyma.01G222300 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Glyma.03G220800 No alias WRKY DNA-binding protein 23 0.02 Orthogroups_2024-Update
Glyma.04G173500 No alias WRKY DNA-binding protein 72 0.02 Orthogroups_2024-Update
Glyma.07G227200 No alias WRKY DNA-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.08G011300 No alias WRKY DNA-binding protein 75 0.02 Orthogroups_2024-Update
Glyma.09G080000 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.09G240000 No alias WRKY DNA-binding protein 72 0.03 Orthogroups_2024-Update
Glyma.09G280200 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
Glyma.12G097100 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.19G020600 No alias WRKY DNA-binding protein 72 0.02 Orthogroups_2024-Update
Glyma.19G221700 No alias WRKY family transcription factor 0.01 Orthogroups_2024-Update
HORVU1Hr1G027700.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G090130.3 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G029460.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G021120.2 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G069320.3 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G071750.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G088200.5 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G013890.3 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g08710 No alias WRKY102, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g14440 No alias WRKY1, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g39720 No alias WRKY70, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g29870 No alias WRKY72, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g02420 No alias WRKY97, expressed 0.02 Orthogroups_2024-Update
MA_11072g0010 No alias (at1g68150 : 82.4) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
MA_138256g0010 No alias (at1g30650 : 163.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
MA_91468g0010 No alias (at4g01720 : 124.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
MA_934202g0010 No alias (at1g62300 : 149.0) Encodes a transcription factor... 0.02 Orthogroups_2024-Update
PSME_00030013-RA No alias (at2g38470 : 151.0) Member of the plant WRKY... 0.03 Orthogroups_2024-Update
PSME_00035862-RA No alias (at3g01970 : 109.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
PSME_00036209-RA No alias (at4g01720 : 157.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
PSME_00036210-RA No alias (at1g62300 : 137.0) Encodes a transcription factor... 0.03 Orthogroups_2024-Update
PSME_00047222-RA No alias (at4g04450 : 178.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
Potri.001G044500 No alias WRKY DNA-binding protein 40 0.02 Orthogroups_2024-Update
Potri.001G472800 No alias WRKY DNA-binding protein 2 0.02 Orthogroups_2024-Update
Potri.002G193000 No alias WRKY DNA-binding protein 23 0.03 Orthogroups_2024-Update
Potri.002G228400 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Potri.004G007500 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Potri.011G169300 No alias WRKY DNA-binding protein 2 0.03 Orthogroups_2024-Update
Potri.014G090300 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Potri.015G064100 No alias WRKY DNA-binding protein 72 0.02 Orthogroups_2024-Update
Potri.015G099200 No alias WRKY DNA-binding protein 75 0.04 Orthogroups_2024-Update
Potri.016G137900 No alias WRKY DNA-binding protein 70 0.02 Orthogroups_2024-Update
Potri.017G104800 No alias WRKY DNA-binding protein 35 0.04 Orthogroups_2024-Update
Potri.019G059300 No alias WRKY DNA-binding protein 55 0.02 Orthogroups_2024-Update
Pp1s109_123V6 No alias wrky11 - superfamily of tfs having wrky and zinc finger domains 0.02 Orthogroups_2024-Update
Pp1s235_126V6 No alias wrky11 - superfamily of tfs having wrky and zinc finger domains 0.02 Orthogroups_2024-Update
Pp1s407_55V6 No alias wrky transcription 0.03 Orthogroups_2024-Update
Seita.1G255500.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.1G334400.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.3G108500.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.3G139400.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.3G143400.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.3G206900.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Seita.3G282000.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.4G033900.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.8G088600.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.8G123100.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.8G187900.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G085700.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G421700.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G006600.1 No alias WRKY-type transcription factor 0.01 Orthogroups_2024-Update
Sobic.001G084000.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G037400.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G285500.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G341100.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G271800.1 No alias WRKY-type transcription factor 0.01 Orthogroups_2024-Update
Sobic.009G100500.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.010G209100.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g095100 No alias WRKY transcription factor 22 0.03 Orthogroups_2024-Update
Solyc04g051690 No alias WRKY transcription factor 51 0.03 Orthogroups_2024-Update
Solyc04g072070 No alias WRKY transcription factor 55 0.03 Orthogroups_2024-Update
Solyc05g015850 No alias WRKY transcription factor 75 0.02 Orthogroups_2024-Update
Solyc07g051840 No alias WRKY transcription factor 17 0.02 Orthogroups_2024-Update
Solyc08g067360 No alias WRKY transcription factor 45 0.03 Orthogroups_2024-Update
Solyc09g014990 No alias WRKY transcription factor 33 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004061 arylformamidase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004864 protein phosphatase inhibitor activity IEP Predicted GO
MF GO:0004865 protein serine/threonine phosphatase inhibitor activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006569 tryptophan catabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009310 amine catabolic process IEP Predicted GO
BP GO:0010563 negative regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
BP GO:0010923 negative regulation of phosphatase activity IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019212 phosphatase inhibitor activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0031400 negative regulation of protein modification process IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0035305 negative regulation of dephosphorylation IEP Predicted GO
BP GO:0035308 negative regulation of protein dephosphorylation IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042402 cellular biogenic amine catabolic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0042436 indole-containing compound catabolic process IEP Predicted GO
BP GO:0042537 benzene-containing compound metabolic process IEP Predicted GO
BP GO:0043086 negative regulation of catalytic activity IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0044092 negative regulation of molecular function IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0045936 negative regulation of phosphate metabolic process IEP Predicted GO
BP GO:0046218 indolalkylamine catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0051346 negative regulation of hydrolase activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0070189 kynurenine metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003657 WRKY_dom 176 232
No external refs found!