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  5. LOC_Os02g18380

LOC_Os02g18380


Description : 60S ribosomal protein L27-3, putative, expressed


Gene families : OG_42_0001324 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g18380
Cluster HCCA clusters: cluster_0072

Target Alias Description ECC score Gene Family Method Actions
166700 No alias Ribosomal L27e protein family 0.03 Orthogroups_2024-Update
A4A49_05318 No alias 60s ribosomal protein l27 0.03 Orthogroups_2024-Update
A4A49_21973 No alias 60s ribosomal protein l27 0.02 Orthogroups_2024-Update
At2g32220 No alias 60S ribosomal protein L27-1... 0.02 Orthogroups_2024-Update
Brara.A02735.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.C03864.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.E02021.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.H00790.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Cre17.g701650 No alias Ribosomal L27e protein family 0.05 Orthogroups_2024-Update
Glyma.15G158400 No alias Ribosomal L27e protein family 0.05 Orthogroups_2024-Update
Kfl00071_0270 kfl00071_0270_v1.1 (q05462|rl27_pea : 209.0) 60S ribosomal protein L27 -... 0.02 Orthogroups_2024-Update
MA_3390g0010 No alias (at3g22230 : 216.0) Ribosomal L27e protein family;... 0.02 Orthogroups_2024-Update
PSME_00015628-RA No alias (at3g22230 : 220.0) Ribosomal L27e protein family;... 0.03 Orthogroups_2024-Update
Potri.001G342500 No alias Ribosomal L27e protein family 0.02 Orthogroups_2024-Update
Pp1s101_74V6 No alias ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s221_49V6 No alias ribosomal protein 0.06 Orthogroups_2024-Update
Pp1s83_116V6 No alias 60S ribosomal protein L27 [Pisum sativum] 0.03 Orthogroups_2024-Update
Sobic.006G221200.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.010G230700.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Solyc06g073300 No alias 60S ribosomal protein L27 (AHRD V3.3 *** A0A0V0HNB9_SOLCH) 0.05 Orthogroups_2024-Update
Solyc07g043360 No alias 60S ribosomal protein L27 (AHRD V3.3 *** K4CEJ5_SOLLC) 0.03 Orthogroups_2024-Update
Sopen06g029660 No alias Ribosomal L27e protein family 0.05 Orthogroups_2024-Update
Sopen07g022920 No alias Ribosomal L27e protein family 0.05 Orthogroups_2024-Update
evm.model.contig_2045.6 No alias (p41101|rl27_soltu : 144.0) 60S ribosomal protein L27 -... 0.06 Orthogroups_2024-Update
evm.model.tig00021275.23 No alias (at3g22230 : 163.0) Ribosomal L27e protein family;... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001141 Ribosomal_L27e 52 137
IPR005824 KOW 7 35
No external refs found!