LOC_Os02g18650

Description : pectinesterase, putative, expressed

Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os02g18650
Cluster	HCCA clusters: cluster_0091

Target	Alias	Description	ECC score	Gene Family Method
Glyma.07G024200	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Orthogroups_2024-Update
Glyma.07G024300	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Orthogroups_2024-Update
Glyma.20G237800	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Orthogroups_2024-Update
MA_2017g0010	No alias	(at5g53370 : 505.0) pectin methylesterase PCR fragment F...	0.02	Orthogroups_2024-Update
PSME_00056054-RA	No alias	(at4g02330 : 471.0) ATPMEPCRB; FUNCTIONS IN:...	0.01	Orthogroups_2024-Update
Sopen06g018010	No alias	Pectinesterase	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	InterProScan predictions
BP	GO:0042545	cell wall modification	IEA	InterProScan predictions
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003714	transcription corepressor activity	IEP	Predicted GO
MF	GO:0008131	primary amine oxidase activity	IEP	Predicted GO
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predicted GO
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0048038	quinone binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006501	Pectinesterase_inhib_dom	39	152
IPR000070	Pectinesterase_cat	236	537

External Links

No external refs found!