1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g21660

LOC_Os02g21660


Description : L1P family of ribosomal proteins domain containing protein, expressed


Gene families : OG_42_0001635 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001635_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g21660
Cluster HCCA clusters: cluster_0085

Target Alias Description ECC score Gene Family Method Actions
230302 No alias Ribosomal protein L1p/L10e family 0.05 Orthogroups_2024-Update
Bradi2g55600 No alias Ribosomal protein L1p/L10e family 0.03 Orthogroups_2024-Update
Bradi3g42800 No alias Ribosomal protein L1p/L10e family 0.05 Orthogroups_2024-Update
Brara.C01003.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.D01641.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.J01470.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Cre02.g101350 No alias Ribosomal protein L1p/L10e family 0.03 Orthogroups_2024-Update
Glyma.13G316400 No alias Ribosomal protein L1p/L10e family 0.03 Orthogroups_2024-Update
Glyma.18G026100 No alias Ribosomal protein L1p/L10e family 0.03 Orthogroups_2024-Update
Glyma.19G194922 No alias Ribosomal protein L1p/L10e family 0.03 Orthogroups_2024-Update
HORVU3Hr1G084310.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
HORVU7Hr1G059090.5 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
MA_12000g0010 No alias (at5g22440 : 343.0) Ribosomal protein L1p/L10e family;... 0.02 Orthogroups_2024-Update
MA_71921g0010 No alias (at1g08360 : 345.0) Ribosomal protein L1p/L10e family;... 0.03 Orthogroups_2024-Update
PSME_00037360-RA No alias (at1g08360 : 341.0) Ribosomal protein L1p/L10e family;... 0.02 Orthogroups_2024-Update
Potri.004G202832 No alias Ribosomal protein L1p/L10e family 0.04 Orthogroups_2024-Update
Potri.007G034800 No alias Ribosomal protein L1p/L10e family 0.05 Orthogroups_2024-Update
Potri.007G035600 No alias Ribosomal protein L1p/L10e family 0.02 Orthogroups_2024-Update
Pp1s40_297V6 No alias 60s ribosomal protein l10a-1 0.03 Orthogroups_2024-Update
Seita.5G389700.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Sobic.003G363800.2 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Solyc01g009520 No alias Ribosomal protein (AHRD V3.3 *** K4ATE8_SOLLC) 0.02 Orthogroups_2024-Update
Solyc06g074300 No alias 5'-3' exonuclease family protein (AHRD V3.3 --* AT3G28030.4) 0.03 Orthogroups_2024-Update
Solyc11g068420 No alias Ribosomal protein (AHRD V3.3 *** M1CHW0_SOLTU) 0.03 Orthogroups_2024-Update
Sopen01g005070 No alias Ribosomal protein L1p/L10e family 0.04 Orthogroups_2024-Update
Sopen06g030750 No alias Ribosomal protein L1p/L10e family 0.04 Orthogroups_2024-Update
Sopen11g027130 No alias Ribosomal protein L1p/L10e family 0.04 Orthogroups_2024-Update
evm.model.contig_2315.2 No alias (at2g27530 : 237.0) Encodes ribosomal protein L10aP.... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 23 210
No external refs found!