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  5. Solyc07g039420

Solyc07g039420


Description : Disease resistance protein (NBS-LRR class) family (AHRD V3.3 --* AT5G38350.1)


Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g039420
Cluster HCCA clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
A4A49_07855 No alias putative late blight resistance protein-like r1b-12 0.02 Orthogroups_2024-Update
A4A49_41267 No alias disease resistance protein rpp13 0.04 Orthogroups_2024-Update
At1g59780 No alias Putative disease resistance protein At1g59780... 0.03 Orthogroups_2024-Update
At3g07040 No alias Disease resistance protein RPM1... 0.03 Orthogroups_2024-Update
At3g46710 No alias Putative disease resistance RPP13-like protein 2... 0.02 Orthogroups_2024-Update
Brara.J01451.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.01G010700 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.20G041300 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Orthogroups_2024-Update
HORVU2Hr1G111750.5 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g21890 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g11990 No alias NB-ARC domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g12050 No alias NBS-LRR type disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G220600 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Seita.J027800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g070750 No alias No description available 0.03 Orthogroups_2024-Update
Sopen10g020540 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 167 313
No external refs found!