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  5. Solyc01g005190

Solyc01g005190


Description : Zinc finger family protein (AHRD V3.3 *** U7E2Y1_POPTR)


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g005190
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
At1g67030 No alias Zinc finger protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q39265] 0.03 Orthogroups_2024-Update
Bradi4g03460 No alias zinc finger protein 7 0.02 Orthogroups_2024-Update
Bradi4g30910 No alias zinc finger protein 2 0.03 Orthogroups_2024-Update
GRMZM2G058868 No alias zinc-finger protein 10 0.04 Orthogroups_2024-Update
Glyma.03G217900 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G199800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G337500.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Solyc01g005200 No alias Zinc finger family protein (AHRD V3.3 *-* U7E1E1_POPTR) 0.02 Orthogroups_2024-Update
Solyc06g053720 No alias Zinc finger, C2H2 (AHRD V3.3 *** A0A124SAQ3_CYNCS) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!