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  5. LOC_Os02g31970

LOC_Os02g31970


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g31970
Cluster HCCA clusters: cluster_0118

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G033880.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os09g07430 No alias retrotransposon, putative, centromere-specific, expressed 0.02 Orthogroups_2024-Update
Solyc11g027680 No alias No description available 0.02 Orthogroups_2024-Update
Sopen06g016840 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 76 149
No external refs found!