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  5. LOC_Os02g32030

LOC_Os02g32030


Description : elongation factor, putative, expressed


Gene families : OG_42_0001704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g32030
Cluster HCCA clusters: cluster_0100

Target Alias Description ECC score Gene Family Method Actions
Bradi3g44480 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G116710.5 No alias mRNA-translocation factor *(eEF2)) 0.03 Orthogroups_2024-Update
Potri.007G065700 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.02 Orthogroups_2024-Update
Sobic.001G021300.1 No alias mRNA-translocation factor *(eEF2)) 0.03 Orthogroups_2024-Update
Sobic.001G021400.1 No alias mRNA-translocation factor *(eEF2)) 0.03 Orthogroups_2024-Update
Sobic.003G280500.1 No alias mRNA-translocation factor *(eEF2)) 0.03 Orthogroups_2024-Update
Solyc08g062910 No alias Elongation factor 2 (AHRD V3.3 *** EF2_ARATH) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005517 Transl_elong_EFG/EF2_IV 611 722
IPR004161 EFTu-like_2 394 467
IPR000795 TF_GTP-bd_dom 18 342
IPR000640 EFG_V-like 724 811
No external refs found!